Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917175.1_cds_XP_016466822.1_59637
CDS Infomation

[gene=LOC107789506] [db_xref=GeneID:107789506] [protein=26S proteasome regulatory subunit 4 homolog A isoform X2] [protein_id=XP_016466822.1] [location=complement(join(7376..7459,8323..8463,8596..8812,8882..9051,9498..9743,10438..10719,10753..10947))] [gbkey=CDS]
Sequence

ATGGGTCAAGGAACACCCGGCGGACTTAACCGGCAACAGCCCGGCGACCGTAAGAACGAC
GGAGACAAGAAGGAGAAGAAGTTCGAACCAGCTGCACCACCGGCACGTGTCGGTCGGAAA
CAGCGTAAACAGAAAGGTTCCGAAGCAGCAGCTCGACTCCCAACGGTTACGCCGCTAACA
AAATGTAAATTTCGGCTCCTAAAGCTCGAGCGAATCAAGGATTACTTGTTAATGGAAGAG
GAATTTGTGGCTAATCAGGAACGATTGAAACCTCAGGAAGAGAAAACGGAAGAGGATCGA
TCTAAAGTTGACGATCTACGTGGATCTCCGATGAGTGTAGGGAATTTGGAGGAACTTATT
GATGAGAATCATGCTATTGTTTCGTCGTCGGTCGGACCGGAGTATTATGTTGGAATCTTA
TCGTTTGTTGATAAGGATCAGCTTGAACCTGGATGTGCTATTTTGATGCATAACAAGGTT
CTATCGGTTGTTGGGCTTCTACAAGATGACGTTGATCCAATGGTGTCTGTCATGAAGGTT
GAGAAAGCTCCCTTGGAATCATATGCTGACATTGGTGGATTAGATGCTCAGATTCAGGAG
ATTAAAGAAGCGGTTGAGCTTCCTTTGACTCACCCTGAGTTATATGAAGACATTGGTATT
AAACCTCCTAAAGGGGTCATTCTGTATGGAGAGCCTGGCACAGGCAAAACCTTGCTTGCT
AAGGCAGTTGCAAACTCCACTTCAGCCACTTTCTTACGTGTTGTTGGAAGTGAACTGATC
CAGAAGTATCTGGGAGATGGGCCTAAATTGGTCAGAGAACTCTTCAGAGTTGCTGATGAT
CTCTCGCCTTCAATTGTCTTTATTGATGAAATTGATGCAGTCGGTACAAAAAGGTATGAT
GCACACTCAGGTGGTGAACGAGAGATTCAGAGGACTATGTTGGAGCTGCTGAACCAGTTA
GATGGCTTTGATTCCAGAGGAGATGTTAAGGTGATTCTTGCAACAAATAAAATTGAGAGT
CTGGATCCTGCCCTGCTTCGGCCTGGTAGGATAGACAGGAAAATTGAGTTCCCTCTTCCA
GATATTAAAACAAGGAGGCGCATTTTCCAGATACACACAGCAAGAATGACTTTGGCTGAT
GATGTCAACTTGGAAGAATTTGTTATGACCAAGGATGAGTTTTCGGGAGCTGATATCAAG
GCAATATGTACTGAAGCTGGATTACTCGCTTTAAGAGAGCGGCGTATGAAGGTTACTCAT
CCAGATTTCAAGAAGGCCAAAGACAAGGTCATGTTCAAGAAGAAAGAGGGAGTGCCAGAA
GGACTTTACATGTAA

Peptide Sequence

PEP ID

XP_016466822.1
PEP Infomation

PREDICTED: 26S proteasome regulatory subunit 4 homolog A isoform X2 [Nicotiana tabacum]
Sequence

MGQGTPGGLNRQQPGDRKNDGDKKEKKFEPAAPPARVGRKQRKQKGSEAAARLPTVTPLT
KCKFRLLKLERIKDYLLMEEEFVANQERLKPQEEKTEEDRSKVDDLRGSPMSVGNLEELI
DENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDDVDPMVSVMKV
EKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLA
KAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD
AHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNKIESLDPALLRPGRIDRKIEFPLP
DIKTRRRIFQIHTARMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH
PDFKKAKDKVMFKKKEGVPEGLYM

Transcript Sequence

Gene sequence data has not been registered.